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Intron Name: Anas_platyrhynchos_platyrhynchos_4_5274038_5274202_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5274038 - 5274202

Intron Length:

165

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTTGA

5'SS Class:

strong_major

3'SS Sequence:

TTCCACTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATCTCAT

U12 Branch Point Sequence:

CTGTGTTAAACC

Flanking Amino Acid:

QGPPGPKGEKGDQGDQGPRM

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.2

0.97

0.8

80.2

30.7

Major BPS

86.1

0.9

0.7

85.7

22.9

Major PPT

82.4

0.73

0.8

76.5

31.6

Minor 5ss

34.1

-1.8

2.8

40.8

45.4

Minor BPS

48.6

-0.1

2.1

61.04

45.1

Associated Gene:

Gene:

COL25A1

Ensembl Gene ID:

ENSAPLG00000008681

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009056

5201163 - 5301226

100064