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Intron Name: Anas_platyrhynchos_platyrhynchos_4_52930938_52947709_F

Intron Information:

Intron Rank:

130411

Intron Class:

major

Intron Phase:

Intron Coordinates:

52930938 - 52947709

Intron Length:

16772

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGTCTG

5'SS Class:

strong_major

3'SS Sequence:

ATATTTTGTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CATTAAT

U12 Branch Point Sequence:

CTTACCTTACAT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

72.7

44.5

Major BPS

79.4

0.73

0.9

79.6

29.1

Major PPT

77.2

0.61

69.9

45.1

Minor 5ss

37.4

-1.4

42.1

44.4

Minor BPS

60.1

0.4

1.8

77.96

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020156

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044958

52896543 - 52950730

54188

ENSAPLT00000028704

52795074 - 52950730

155657