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Intron Name: Anas_platyrhynchos_platyrhynchos_4_52947794_52949149_F

Intron Information:

Intron Rank:

130412

Intron Class:

major

Intron Phase:

Intron Coordinates:

52947794 - 52949149

Intron Length:

1356

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAGGTTGC

5'SS Class:

major

3'SS Sequence:

TTTTTTTTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTGAT

U12 Branch Point Sequence:

AATTTTGTGATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.3

0.64

65.8

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

95.8

1.03

0.5

96.6

11.7

Minor 5ss

39.3

-1.2

3.1

49.2

42.4

Minor BPS

48.8

-0

1.9

68.66

36.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020156

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044958

52896543 - 52950730

54188

ENSAPLT00000028704

52795074 - 52950730

155657