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Intron Name: Anas_platyrhynchos_platyrhynchos_4_53027885_53029854_F

Intron Information:

Intron Rank:

130249

Intron Class:

major

Intron Phase:

Intron Coordinates:

53027885 - 53029854

Intron Length:

1970

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAACTTT

5'SS Class:

strong_major

3'SS Sequence:

GTCATCCTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAA

U12 Branch Point Sequence:

GTTTTTGAAACT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.78

0.9

81.2

33.8

Major BPS

87.2

0.92

0.8

77.7

37.1

Major PPT

76.6

0.6

0.9

69.5

36.7

Minor 5ss

49.1

-0.1

73.2

43.7

Minor BPS

49.1

0.01

2.3

75.46

41.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020053

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027917

53007218 - 53030220

23003

ENSAPLT00000019380

53027725 - 53070130

42406