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Intron Name: Anas_platyrhynchos_platyrhynchos_4_53029931_53045738_F

Intron Information:

Intron Rank:

130250

Intron Class:

major

Intron Phase:

Intron Coordinates:

53029931 - 53045738

Intron Length:

15808

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGTAA

5'SS Class:

strong_major

3'SS Sequence:

TTTCGGTGAACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTCAA

U12 Branch Point Sequence:

TTTCGGTGAACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.8

0.96

0.8

28.7

Major BPS

75.6

0.64

1.1

77.7

37.1

Major PPT

66.3

0.37

1.1

61.5

43.5

Minor 5ss

-1.6

3.3

46.2

49.1

Minor BPS

47.1

-0.2

2.5

69.78

42.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020053

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019380

53027725 - 53070130

42406