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Intron Name: Anas_platyrhynchos_platyrhynchos_4_53105822_53147098_F

Intron Information:

Intron Rank:

148638

Intron Class:

major

Intron Phase:

Intron Coordinates:

53105822 - 53147098

Intron Length:

41277

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGTCTT

5'SS Class:

strong_major

3'SS Sequence:

GCTTCTGTCTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTCTCAT

U12 Branch Point Sequence:

CAATGCAAAAGT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.3

0.88

0.9

81.8

38.5

Major BPS

77.2

0.67

1.2

79.6

35.6

Major PPT

0.47

0.9

Minor 5ss

38.8

-1.3

3.4

58.1

46.5

Minor BPS

38.8

-0.7

2.3

54.47

46.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030028

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048041

53074580 - 53148439

73860