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Intron Name: Anas_platyrhynchos_platyrhynchos_4_53344841_53410026_F

Intron Information:

Intron Rank:

132531

Intron Class:

major

Intron Phase:

Intron Coordinates:

53344841 - 53410026

Intron Length:

65186

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGTCCA

5'SS Class:

strong_major

3'SS Sequence:

TCTAATCCTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

TGTATTCTAATC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.7

0.82

71.6

40.2

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

77.9

0.63

0.9

36.3

Minor 5ss

34.1

-1.8

2.8

34.5

Minor BPS

51.5

0.03

1.6

63.98

35.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021215

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040048

53344616 - 53435633

91018