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Intron Name: Anas_platyrhynchos_platyrhynchos_4_53410102_53435485_F

Intron Information:

Intron Rank:

132529

Intron Class:

major

Intron Phase:

Intron Coordinates:

53410102 - 53435485

Intron Length:

25384

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGTGTC

5'SS Class:

strong_major

3'SS Sequence:

TTCTTTCCCACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATATGAT

U12 Branch Point Sequence:

AATATGATGACT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.1

0.87

0.9

81.2

32.7

Major BPS

75.8

0.64

65.8

Major PPT

84.6

0.78

0.7

80.2

25.4

Minor 5ss

35.9

-1.6

3.5

51.5

45.7

Minor BPS

43.6

-0.4

2.2

63.64

40.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021215

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034971

53409832 - 53436625

26794

ENSAPLT00000040048

53344616 - 53435633

91018