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Intron Name: Anas_platyrhynchos_platyrhynchos_4_53410446_53412877_R

Intron Information:

Intron Rank:

129727

Intron Class:

major

Intron Phase:

Intron Coordinates:

53410446 - 53412877

Intron Length:

2432

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGATTA

5'SS Class:

strong_major

3'SS Sequence:

TTTCTTCCTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCAGAA

U12 Branch Point Sequence:

TGCAGAAGAATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.1

0.78

0.9

80.6

27.4

Major BPS

49.9

-0

1.1

46.7

38.9

Major PPT

90.7

0.92

0.6

89.3

19.6

Minor 5ss

43.2

-0.7

3.1

56.6

Minor BPS

37.1

-0.9

2.1

52.72

41.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016977

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021863

53409832 - 53428320

18489