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Intron Name: Anas_platyrhynchos_platyrhynchos_4_53523601_53524887_F

Intron Information:

Intron Rank:

127443

Intron Class:

major

Intron Phase:

Intron Coordinates:

53523601 - 53524887

Intron Length:

1287

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTAAGTGGG

5'SS Class:

strong_major

3'SS Sequence:

TTAACTATTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAA

U12 Branch Point Sequence:

TGATCTTTAACT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.3

0.74

69.1

41.9

Major BPS

85.3

0.88

0.8

84.2

21.8

Major PPT

77.8

0.62

0.9

74.5

39.7

Minor 5ss

34.5

-1.8

3.3

44.8

43.4

Minor BPS

1.11

89.81

33.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018738

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021513

53523593 - 53574056

50464

ENSAPLT00000040908

53523593 - 53573654

50062