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Intron Name: Anas_platyrhynchos_platyrhynchos_4_53586406_53589494_F

Intron Information:

Intron Rank:

127446

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

53586406 - 53589494

Intron Length:

3089

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTGTA

5'SS Class:

strong_major

3'SS Sequence:

AGAAAAATTACAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TCTACAT

U12 Branch Point Sequence:

TTCTACATCACC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.2

0.88

0.9

84.3

26.3

Major BPS

70.2

0.5

1.1

77.2

Major PPT

55.5

0.12

1.1

44.5

44.8

Minor 5ss

-1.4

3.3

49.4

41.3

Minor BPS

48.7

-0.1

2.2

68.37

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018738

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023226

53586180 - 53589544

3365