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Intron Name: Anas_platyrhynchos_platyrhynchos_4_53596792_53598818_F

Intron Information:

Intron Rank:

141363

Intron Class:

major

Intron Phase:

Intron Coordinates:

53596792 - 53598818

Intron Length:

2027

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTATGTTTA

5'SS Class:

strong_major

3'SS Sequence:

CTGTGCTTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCTTCAG

U12 Branch Point Sequence:

TCAGGGTGGACT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.3

0.76

0.9

78.5

31.3

Major BPS

48.3

-0.1

1.7

59.3

47.1

Major PPT

0.58

0.9

73.4

37.1

Minor 5ss

50.1

0.01

2.4

63.4

43.4

Minor BPS

38.7

-0.8

2.5

55.92

46.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026130

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034947

53596649 - 53606982

10334

ENSAPLT00000017960

53596649 - 53602519

5871