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Intron Name: Anas_platyrhynchos_platyrhynchos_4_53598694_53598818_F

Intron Information:

Intron Rank:

141365

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

53598694 - 53598818

Intron Length:

125

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTATGCTGA

5'SS Class:

weak_major

3'SS Sequence:

CTGTGCTTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCTTCAG

U12 Branch Point Sequence:

TCAGGGTGGACT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.7

0.44

1.1

60.6

40.8

Major BPS

48.3

-0.1

1.7

59.3

47.1

Major PPT

0.58

0.9

73.4

37.1

Minor 5ss

56.1

0.21

2.4

68.1

43.4

Minor BPS

38.7

-0.8

2.5

55.92

46.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026130

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020830

53597827 - 53602519

4693