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Intron Name: Anas_platyrhynchos_platyrhynchos_4_53956069_53960423_R

Intron Information:

Intron Rank:

151433

Intron Class:

major

Intron Phase:

Intron Coordinates:

53956069 - 53960423

Intron Length:

4355

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTGAGTTAT

5'SS Class:

strong_major

3'SS Sequence:

AACTTAATTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACTTAAT

U12 Branch Point Sequence:

TTACCTATAATA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.1

0.8

0.9

80.1

30.7

Major BPS

78.2

0.7

77.9

32.1

Major PPT

71.1

0.47

62.9

41.3

Minor 5ss

-1.6

2.9

40.8

45.4

Minor BPS

59.9

0.31

1.6

70.78

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029033

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040022

53955880 - 53975009

19130