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Intron Name: Anas_platyrhynchos_platyrhynchos_4_53960522_53963607_R

Intron Information:

Intron Rank:

151434

Intron Class:

major

Intron Phase:

Intron Coordinates:

53960522 - 53963607

Intron Length:

3086

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTGAGTGTC

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTCCTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGTTAAC

U12 Branch Point Sequence:

TTTTTTTTTCCT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.78

0.9

75.7

34.4

Major BPS

65.7

0.39

1.1

67.4

36.7

Major PPT

90.2

0.9

0.6

89.9

18.2

Minor 5ss

31.4

-2.1

3.2

35.2

41.4

Minor BPS

45.5

-0.2

3.6

82.93

38.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029033

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040022

53955880 - 53975009

19130