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Intron Name: Anas_platyrhynchos_platyrhynchos_4_53963688_53968128_R

Intron Information:

Intron Rank:

151435

Intron Class:

major

Intron Phase:

Intron Coordinates:

53963688 - 53968128

Intron Length:

4441

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTTAC

5'SS Class:

strong_major

3'SS Sequence:

TTACAATTTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTACAA

U12 Branch Point Sequence:

TTCCGCTTACAA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

96.6

1.1

0.7

87.5

21.2

Major BPS

64.7

0.37

31.5

Major PPT

71.9

0.49

0.9

42.7

Minor 5ss

40.5

-1.1

2.8

45.2

Minor BPS

47.1

-0.2

2.1

61.76

44.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029033

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040022

53955880 - 53975009

19130