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Intron Name: Anas_platyrhynchos_platyrhynchos_4_54009687_54037070_R

Intron Information:

Intron Rank:

144575

Intron Class:

major

Intron Phase:

Intron Coordinates:

54009687 - 54037070

Intron Length:

27384

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAGGTGTT

5'SS Class:

strong_major

3'SS Sequence:

ATCCTTTGTGTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTAAT

U12 Branch Point Sequence:

TCTTGTTGAATC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.7

0.72

77.9

36.8

Major BPS

91.8

1.04

0.7

90.2

19.3

Major PPT

0.52

0.9

69.2

36.3

Minor 5ss

37.4

-1.4

3.6

54.1

45.6

Minor BPS

53.6

0.09

1.9

66.43

40.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025109

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043478

54009521 - 54038147

28627