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Intron Name: Anas_platyrhynchos_platyrhynchos_4_54054637_54055226_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

54054637 - 54055226

Intron Length:

590

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGTAGTAG

5'SS Class:

weak_major

3'SS Sequence:

CCACCGCCGTCAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CGTCCAC

U12 Branch Point Sequence:

CCGCCGTCCACC

Flanking Amino Acid:

MHVAVHGLLLA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

59.6

0.23

50.4

36.4

Major BPS

-0.2

1.3

53.5

Major PPT

0.16

53.9

36.4

Minor 5ss

36.2

-1.6

3.3

42.2

47.2

Minor BPS

37.9

-0.9

2.4

43.22

44.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017453

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036521

54050226 - 54055229

5004