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Intron Name: Anas_platyrhynchos_platyrhynchos_4_54057978_54058550_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

54057978 - 54058550

Intron Length:

573

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGAGCT

5'SS Class:

strong_major

3'SS Sequence:

TTTCTGTGTCTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

TTTATTCTAATG

Flanking Amino Acid:

YLVDRPRRVNSSAFQEADIV

Intron Amino Acid Position:

888

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.5

0.79

0.9

74.3

34.2

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

0.58

0.9

69.4

41.7

Minor 5ss

39.2

-1.2

3.4

56.9

47.4

Minor BPS

53.6

-0

1.7

64.05

38.4

Associated Gene:

Gene:

PCDH10

Ensembl Gene ID:

ENSAPLG00000020479

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029418

54054037 - 54067470

13434

ENSAPLT00000038151

54054037 - 54084010

29974