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Intron Name: Anas_platyrhynchos_platyrhynchos_4_54058658_54067117_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

54058658 - 54067117

Intron Length:

8460

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGTCTG

5'SS Class:

strong_major

3'SS Sequence:

CTCATGCTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTCAT

U12 Branch Point Sequence:

TTTTCTCTCATG

Flanking Amino Acid:

HDATNRGQSSGMDLFSNCTE

Intron Amino Acid Position:

924

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.9

74.5

41.9

Major BPS

82.6

0.81

0.9

83.3

27.7

Major PPT

75.7

0.58

0.9

68.7

37.1

Minor 5ss

-1.4

47.2

42.5

Minor BPS

-0.1

2.1

67.5

40.9

Associated Gene:

Gene:

PCDH10

Ensembl Gene ID:

ENSAPLG00000020479

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038151

54054037 - 54084010

29974

ENSAPLT00000029418

54054037 - 54067470

13434