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Intron Name: Anas_platyrhynchos_platyrhynchos_4_54162608_54164498_F

Intron Information:

Intron Rank:

133405

Intron Class:

major

Intron Phase:

Intron Coordinates:

54162608 - 54164498

Intron Length:

1891

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGTGAA

5'SS Class:

strong_major

3'SS Sequence:

TTACTGCTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTGAA

U12 Branch Point Sequence:

AGTGATTTAAGC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

96.3

1.09

0.7

86.7

22.1

Major BPS

74.8

0.62

39.8

Major PPT

79.6

0.67

0.9

73.4

36.9

Minor 5ss

-2.1

3.1

39.9

46.1

Minor BPS

48.1

-0.1

1.9

58.1

40.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021752

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026598

54160202 - 54164614

4413