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Intron Name: Anas_platyrhynchos_platyrhynchos_4_54248920_54263426_F

Intron Information:

Intron Rank:

133403

Intron Class:

major

Intron Phase:

Intron Coordinates:

54248920 - 54263426

Intron Length:

14507

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTTGGTATC

5'SS Class:

major

3'SS Sequence:

TGTCTTCTCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACATAAT

U12 Branch Point Sequence:

ATTGTGTTATTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.4

0.43

1.2

40.4

Major BPS

66.4

0.41

1.1

66.3

36.5

Major PPT

80.9

0.7

0.8

73.1

37.3

Minor 5ss

35.4

-1.7

43.6

37.9

Minor BPS

46.5

-0.1

2.3

69.06

42.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021752

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021791

54134806 - 54264381

129576