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Intron Name: Anas_platyrhynchos_platyrhynchos_4_54473876_54477352_F

Intron Information:

Intron Rank:

146127

Intron Class:

major

Intron Phase:

Intron Coordinates:

54473876 - 54477352

Intron Length:

3477

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGCTG

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTGTTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGAAAT

U12 Branch Point Sequence:

TGTACTTGAAAT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

69.5

42.7

Major BPS

67.2

0.43

1.2

73.3

39.1

Major PPT

87.7

0.85

0.8

88.9

28.2

Minor 5ss

28.9

-2.4

3.3

37.6

47.1

Minor BPS

58.9

0.36

1.6

76.18

39.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028717

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024861

54432327 - 54483352

51026