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Intron Name: Anas_platyrhynchos_platyrhynchos_4_54507427_54534480_F

Intron Information:

Intron Rank:

133352

Intron Class:

major

Intron Phase:

Intron Coordinates:

54507427 - 54534480

Intron Length:

27054

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGAGTG

5'SS Class:

strong_major

3'SS Sequence:

TCTCTGTACACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTAAG

U12 Branch Point Sequence:

CTTGTATTAAGC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.9

0.78

0.9

71.6

38.5

Major BPS

67.8

0.44

1.5

75.9

36.3

Major PPT

73.4

0.53

0.9

68.2

36.6

Minor 5ss

40.1

-1.1

3.4

55.2

Minor BPS

48.7

-0.1

62.34

43.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021704

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032593

54507057 - 54540385

33329