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Intron Name: Anas_platyrhynchos_platyrhynchos_4_54558634_54559864_F

Intron Information:

Intron Rank:

124135

Intron Class:

major

Intron Phase:

Intron Coordinates:

54558634 - 54559864

Intron Length:

1231

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGT|GTATGTGCA

5'SS Class:

major

3'SS Sequence:

ATTAAATCTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAA

U12 Branch Point Sequence:

ATCTTCTCAACT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

65.8

0.37

1.1

60.7

38.2

Major BPS

85.7

0.89

0.8

85.9

22.5

Major PPT

70.9

0.47

59.9

45.3

Minor 5ss

-1

3.1

50.4

Minor BPS

69.4

0.69

1.5

82.24

39.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016907

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041054

54558353 - 54562893

4541