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Intron Name: Anas_platyrhynchos_platyrhynchos_4_54589965_54601618_F

Intron Information:

Intron Rank:

136463

Intron Class:

major

Intron Phase:

Intron Coordinates:

54589965 - 54601618

Intron Length:

11654

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTATGTACA

5'SS Class:

strong_major

3'SS Sequence:

GGCTATGTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTGAT

U12 Branch Point Sequence:

GTATTCTGAATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

0.9

75.1

34.3

Major BPS

91.3

1.03

0.7

79.6

35.6

Major PPT

69.9

0.45

65.1

45.3

Minor 5ss

42.2

-0.9

2.4

48.9

42.2

Minor BPS

66.7

0.6

1.4

78.4

37.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023528

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048236

54589758 - 54604285

14528