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Intron Name: Anas_platyrhynchos_platyrhynchos_4_54601700_54610761_F

Intron Information:

Intron Rank:

136461

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

54601700 - 54610761

Intron Length:

9062

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGAGAG

5'SS Class:

strong_major

3'SS Sequence:

TTTTAATATTGAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

ATCTTTTTAATA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.6

0.84

0.8

71.2

34.6

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

58.9

0.2

1.8

71.1

43.3

Minor 5ss

24.3

-3

3.1

28.4

43.8

Minor BPS

70.9

0.65

1.1

72.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023528

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035820

54601527 - 54614032

12506