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Intron Name: Anas_platyrhynchos_platyrhynchos_4_54632534_54632859_F

Intron Information:

Intron Rank:

131797

Intron Class:

major

Intron Phase:

Intron Coordinates:

54632534 - 54632859

Intron Length:

326

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTCCA

5'SS Class:

strong_major

3'SS Sequence:

AATTGAATTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TCTATTTTAATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

74.4

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

69.9

0.45

64.3

45.2

Minor 5ss

36.2

-1.6

2.9

37.7

Minor BPS

69.9

0.7

1.2

79.53

37.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020744

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023290

54632315 - 54635807

3493