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Intron Name: Anas_platyrhynchos_platyrhynchos_4_54657810_54690302_F

Intron Information:

Intron Rank:

131799

Intron Class:

major

Intron Phase:

Intron Coordinates:

54657810 - 54690302

Intron Length:

32493

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGTCTA

5'SS Class:

strong_major

3'SS Sequence:

CTTTCTTCTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAA

U12 Branch Point Sequence:

ATGTGTTTCACT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.4

0.91

0.9

79.8

35.3

Major BPS

90.8

1.01

0.7

91.9

19.6

Major PPT

89.1

0.88

0.6

84.6

23.2

Minor 5ss

37.9

-1.4

47.1

42.6

Minor BPS

50.6

0.1

2.2

73.52

43.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020744

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027373

54657747 - 54690508

32762