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Intron Name: Anas_platyrhynchos_platyrhynchos_4_54662738_54675023_F

Intron Information:

Intron Rank:

145084

Intron Class:

major

Intron Phase:

Intron Coordinates:

54662738 - 54675023

Intron Length:

12286

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTT|GTGAGTAGG

5'SS Class:

major

3'SS Sequence:

TTTTTTTCTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAA

U12 Branch Point Sequence:

TTTGTTTTATCC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.7

0.49

1.1

63.5

42.3

Major BPS

87.2

0.92

0.8

77.7

37.1

Major PPT

91.9

0.94

0.5

89.3

19.5

Minor 5ss

32.3

-2

2.7

39.4

40.3

Minor BPS

60.8

0.32

1.7

73.08

38.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028249

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037622

54662573 - 54676505

13933