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Intron Name: Anas_platyrhynchos_platyrhynchos_4_54672820_54675023_F

Intron Information:

Intron Rank:

145082

Intron Class:

major

Intron Phase:

Intron Coordinates:

54672820 - 54675023

Intron Length:

2204

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAT|GTGAGCTAA

5'SS Class:

major

3'SS Sequence:

TTTTTTTCTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAA

U12 Branch Point Sequence:

TTTGTTTTATCC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.1

0.57

69.3

33.1

Major BPS

87.2

0.92

0.8

77.7

37.1

Major PPT

91.9

0.94

0.5

89.3

19.5

Minor 5ss

40.1

-1.1

50.9

46.1

Minor BPS

60.8

0.32

1.7

73.08

38.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028249

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032866

54662573 - 54676505

13933