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Intron Name: Anas_platyrhynchos_platyrhynchos_4_54729173_54738825_F

Intron Information:

Intron Rank:

143948

Intron Class:

major

Intron Phase:

Intron Coordinates:

54729173 - 54738825

Intron Length:

9653

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGTGCATA

5'SS Class:

major

3'SS Sequence:

AAATTTTCCTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAGTTAA

U12 Branch Point Sequence:

GTTAAGACAACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.8

0.7

0.9

75.8

35.3

Major BPS

55.5

0.14

1.1

47.4

37.5

Major PPT

69.1

0.43

0.9

67.1

39.3

Minor 5ss

43.6

-0.7

2.8

56.7

47.6

Minor BPS

-0.8

2.4

55.77

42.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027585

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040723

54728830 - 54762490

33661

ENSAPLT00000017886

54691741 - 54751827

60087