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Intron Name: Anas_platyrhynchos_platyrhynchos_4_54738975_54751717_F

Intron Information:

Intron Rank:

143949

Intron Class:

major

Intron Phase:

Intron Coordinates:

54738975 - 54751717

Intron Length:

12743

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTAAC

5'SS Class:

strong_major

3'SS Sequence:

TTCCTTAAATTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTGAT

U12 Branch Point Sequence:

TCTTCCTTAAAT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.3

0.93

0.8

83.1

28.6

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

67.2

0.39

68.1

36.5

Minor 5ss

42.1

-0.9

2.5

53.5

43.9

Minor BPS

84.3

1.15

1.2

93.4

34.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027585

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017886

54691741 - 54751827

60087