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Intron Name: Anas_platyrhynchos_platyrhynchos_4_54773967_54782944_F

Intron Information:

Intron Rank:

143764

Intron Class:

major

Intron Phase:

Intron Coordinates:

54773967 - 54782944

Intron Length:

8978

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAATACT

5'SS Class:

major

3'SS Sequence:

TTGTTCTTAACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCTTAAT

U12 Branch Point Sequence:

TTGTTCTTAACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.68

77.8

36.9

Major BPS

74.6

0.61

1.1

75.5

35.1

Major PPT

80.9

0.7

0.9

77.5

35.6

Minor 5ss

37.3

-1.4

2.8

44.1

43.3

Minor BPS

84.8

1.09

86.8

31.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027466

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048018

54772334 - 54786053

13720