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Intron Name: Anas_platyrhynchos_platyrhynchos_4_54785783_54786033_F

Intron Information:

Intron Rank:

143756

Intron Class:

major

Intron Phase:

Intron Coordinates:

54785783 - 54786033

Intron Length:

251

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGGGAGTA

5'SS Class:

major

3'SS Sequence:

CTATTTTTTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTAAA

U12 Branch Point Sequence:

TTCATGTTAAAT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.3

0.67

71.2

34.5

Major BPS

75.2

0.63

1.1

75.9

36.3

Major PPT

87.6

0.85

0.8

80.5

36.9

Minor 5ss

27.2

-2.6

3.6

37.3

47.4

Minor BPS

0.08

2.2

73.28

43.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027466

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048018

54772334 - 54786053

13720

ENSAPLT00000025250

54782513 - 54792186

9674