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Intron Name: Anas_platyrhynchos_platyrhynchos_4_54788235_54792153_F

Intron Information:

Intron Rank:

143754

Intron Class:

major

Intron Phase:

Intron Coordinates:

54788235 - 54792153

Intron Length:

3919

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGTTAA

5'SS Class:

strong_major

3'SS Sequence:

TGCTGGGATACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTTAT

U12 Branch Point Sequence:

ATCCTCTTATTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.2

0.92

0.8

26.1

Major BPS

79.1

0.72

69.3

38.4

Major PPT

61.4

0.26

1.1

53.2

45.2

Minor 5ss

39.7

-1.2

2.8

45.9

43.7

Minor BPS

56.9

0.29

1.6

71.06

40.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027466

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038596

54787995 - 54793446

5452

ENSAPLT00000025250

54782513 - 54792186

9674

ENSAPLT00000019551

54782513 - 54792250

9738