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Intron Name: Anas_platyrhynchos_platyrhynchos_4_54820881_54822998_F

Intron Information:

Intron Rank:

131248

Intron Class:

major

Intron Phase:

Intron Coordinates:

54820881 - 54822998

Intron Length:

2118

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTTTGGAAT

5'SS Class:

major

3'SS Sequence:

ATTTTATCTCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTTAT

U12 Branch Point Sequence:

TCTTCTTTATCT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.1

0.52

1.2

72.5

38.2

Major BPS

87.7

0.94

0.8

77.7

36.7

Major PPT

79.4

0.66

0.8

71.6

39.1

Minor 5ss

36.4

-1.5

48.6

47.3

Minor BPS

0.83

1.5

87.39

38.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020513

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039770

54820558 - 54826641

6084

ENSAPLT00000019704

54820558 - 54826682

6125