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Intron Name: Anas_platyrhynchos_platyrhynchos_4_54823449_54825455_F

Intron Information:

Intron Rank:

131254

Intron Class:

major

Intron Phase:

Intron Coordinates:

54823449 - 54825455

Intron Length:

2007

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTGAGTATG

5'SS Class:

strong_major

3'SS Sequence:

CTTCTTCTTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTAAA

U12 Branch Point Sequence:

ATTCCTTTAAAA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.6

0.79

0.9

77.8

38.7

Major BPS

73.8

0.59

0.9

26.8

Major PPT

89.1

0.88

0.6

84.3

23.6

Minor 5ss

33.5

-1.9

2.8

34.2

41.4

Minor BPS

70.6

0.64

1.3

76.83

33.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020513

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039770

54820558 - 54826641

6084