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Intron Name: Anas_platyrhynchos_platyrhynchos_4_54823449_54826570_F

Intron Information:

Intron Rank:

131249

Intron Class:

major

Intron Phase:

Intron Coordinates:

54823449 - 54826570

Intron Length:

3122

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTGAGTATG

5'SS Class:

strong_major

3'SS Sequence:

TGATTTGTTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTGAT

U12 Branch Point Sequence:

CTGTGCTTACCC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.6

0.79

0.9

77.8

38.7

Major BPS

78.6

0.71

1.2

71.4

45.1

Major PPT

77.9

0.63

69.4

45.8

Minor 5ss

33.5

-1.9

2.8

34.2

41.4

Minor BPS

52.5

0.06

2.1

65.47

46.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020513

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019704

54820558 - 54826682

6125