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Intron Name: Anas_platyrhynchos_platyrhynchos_4_54826722_54832497_F

Intron Information:

Intron Rank:

131250

Intron Class:

major

Intron Phase:

Intron Coordinates:

54826722 - 54832497

Intron Length:

5776

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTAAT

5'SS Class:

strong_major

3'SS Sequence:

CTTCTGTTTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TATGGCTAAAAA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.5

1.05

0.7

92.2

16.5

Major BPS

90.4

0.7

90.2

19.3

Major PPT

86.3

0.82

0.8

83.9

31.1

Minor 5ss

-2.1

2.8

41.5

45.1

Minor BPS

46.3

-0.2

2.2

61.46

44.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020513

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031913

54826456 - 54832638

6183