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Intron Name: Anas_platyrhynchos_platyrhynchos_4_54836351_54854447_F

Intron Information:

Intron Rank:

131257

Intron Class:

major

Intron Phase:

Intron Coordinates:

54836351 - 54854447

Intron Length:

18097

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTGGTTAT

5'SS Class:

major

3'SS Sequence:

TCAATTCCTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTCAA

U12 Branch Point Sequence:

TTTTCTTCAATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.8

0.61

1.2

76.1

35.9

Major BPS

78.2

0.7

79.9

32.6

Major PPT

76.2

0.59

0.9

69.9

36.2

Minor 5ss

36.8

-1.5

3.1

49.5

46.8

Minor BPS

77.2

0.93

1.4

92.06

30.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020513

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046620

54832272 - 54854845

22574