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Intron Name: Anas_platyrhynchos_platyrhynchos_4_54982213_54986313_F

Intron Information:

Intron Rank:

145304

Intron Class:

major

Intron Phase:

Intron Coordinates:

54982213 - 54986313

Intron Length:

4101

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAGGTGCT

5'SS Class:

strong_major

3'SS Sequence:

TATCTTATTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTGAT

U12 Branch Point Sequence:

TCTAATTAAACT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.6

0.86

0.9

78.9

33.5

Major BPS

91.3

1.03

0.7

79.6

35.6

Major PPT

84.3

0.77

0.8

81.9

Minor 5ss

33.9

-1.8

3.5

49.9

46.5

Minor BPS

52.5

0.16

1.9

73.22

43.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028336

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027638

54976077 - 55008789

32713