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Intron Name: Anas_platyrhynchos_platyrhynchos_4_55004096_55008779_F

Intron Information:

Intron Rank:

145299

Intron Class:

major

Intron Phase:

Intron Coordinates:

55004096 - 55008779

Intron Length:

4684

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTCAGTACA

5'SS Class:

major

3'SS Sequence:

TTATTTTCCTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

ATGTTCTTATTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.3

0.57

1.3

73.3

37.4

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

85.6

0.8

0.7

85.1

29.4

Minor 5ss

31.6

-2.1

2.5

32.6

35.1

Minor BPS

64.5

0.53

1.6

77.51

39.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028336

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020920

54990569 - 55008789

18221

ENSAPLT00000027638

54976077 - 55008789

32713

ENSAPLT00000025589

54976077 - 55008782

32706