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Intron Name: Anas_platyrhynchos_platyrhynchos_4_55005872_55008779_F

Intron Information:

Intron Rank:

145307

Intron Class:

major

Intron Phase:

Intron Coordinates:

55005872 - 55008779

Intron Length:

2908

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGCAC

5'SS Class:

strong_major

3'SS Sequence:

TTATTTTCCTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

ATGTTCTTATTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.3

0.9

38.2

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

85.6

0.8

0.7

85.1

29.4

Minor 5ss

-2.2

3.3

45.6

Minor BPS

64.5

0.53

1.6

77.51

39.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028336

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029129

55005731 - 55009002

3272