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Intron Name: Anas_platyrhynchos_platyrhynchos_4_5518816_5518941_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5518816 - 5518941

Intron Length:

126

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAATCACT

5'SS Class:

major

3'SS Sequence:

TATCCTCCTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCCTAT

U12 Branch Point Sequence:

TGTACCCTAACG

Flanking Amino Acid:

TSAPQSYSAFATGSMYGQAF

Intron Amino Acid Position:

152

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.1

0.55

1.1

69.9

40.2

Major BPS

68.8

0.47

1.3

66.7

41.7

Major PPT

80.2

0.68

0.8

30.6

Minor 5ss

42.2

-0.9

2.9

56.2

42.1

Minor BPS

62.8

0.26

1.8

70.32

42.1

Associated Gene:

Gene:

SEC24B

Ensembl Gene ID:

ENSAPLG00000009250

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036095

5513334 - 5556179

42846