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Intron Name: Anas_platyrhynchos_platyrhynchos_4_55229307_55229520_R

Intron Information:

Intron Rank:

138774

Intron Class:

major

Intron Phase:

Intron Coordinates:

55229307 - 55229520

Intron Length:

214

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTGTGTGAC

5'SS Class:

strong_major

3'SS Sequence:

TCCCCTAAAACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAA

U12 Branch Point Sequence:

TTTCCCCTAAAA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.4

0.79

0.9

73.6

30.4

Major BPS

87.2

0.92

0.8

77.7

37.1

Major PPT

63.2

0.3

58.7

34.8

Minor 5ss

33.6

-1.9

3.1

42.4

45.1

Minor BPS

64.8

0.46

1.8

79.61

35.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022173

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024511

55228321 - 55242274

13954

ENSAPLT00000039570

55228321 - 55242274

13954

ENSAPLT00000025604

55207896 - 55229596

21701