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Intron Name: Anas_platyrhynchos_platyrhynchos_4_55229655_55241606_R

Intron Information:

Intron Rank:

138775

Intron Class:

major

Intron Phase:

Intron Coordinates:

55229655 - 55241606

Intron Length:

11952

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTGGT

5'SS Class:

strong_major

3'SS Sequence:

TGTTTATTCACAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTTAT

U12 Branch Point Sequence:

TGTTTATTCACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.6

0.89

0.9

77.9

36.9

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

82.2

0.72

0.8

76.6

36.5

Minor 5ss

40.5

-1.1

3.2

58.3

46.4

Minor BPS

55.5

0.17

72.91

38.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022173

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024511

55228321 - 55242274

13954