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Intron Name: Anas_platyrhynchos_platyrhynchos_4_5530880_5534755_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5530880 - 5534755

Intron Length:

3876

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTGGCTTT

5'SS Class:

major

3'SS Sequence:

TTTCCCTCTCTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACTTTAT

U12 Branch Point Sequence:

AGTCACCTAACT

Flanking Amino Acid:

EEEDEEDEEAAIDSSSTTSS

Intron Amino Acid Position:

371

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.2

0.48

1.2

70.9

41.9

Major BPS

75.1

0.62

65.6

Major PPT

81.5

0.71

0.7

74.2

Minor 5ss

44.7

-0.6

3.2

64.8

46.5

Minor BPS

54.5

0.22

1.9

75.35

40.1

Associated Gene:

Gene:

SEC24B

Ensembl Gene ID:

ENSAPLG00000009250

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036095

5513334 - 5556179

42846

ENSAPLT00000009721

5513334 - 5556179

42846