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Intron Name: Anas_platyrhynchos_platyrhynchos_4_5534837_5537321_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5534837 - 5537321

Intron Length:

2485

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCTGT

5'SS Class:

strong_major

3'SS Sequence:

TTTGTCCTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTGAA

U12 Branch Point Sequence:

GTATATTGAATA

Flanking Amino Acid:

YDALEGGGYPETRSVTSSPV

Intron Amino Acid Position:

398

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.4

0.84

0.9

74.8

38.1

Major BPS

79.4

0.73

0.9

69.6

37.5

Major PPT

86.2

0.81

0.8

77.7

36.7

Minor 5ss

40.1

-1.1

3.1

55.9

48.3

Minor BPS

52.6

0.08

1.6

63.1

36.8

Associated Gene:

Gene:

SEC24B

Ensembl Gene ID:

ENSAPLG00000009250

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036095

5513334 - 5556179

42846

ENSAPLT00000018227

5513334 - 5556179

42846

ENSAPLT00000009721

5513334 - 5556179

42846