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Intron Name: Anas_platyrhynchos_platyrhynchos_4_55387163_55396108_R

Intron Information:

Intron Rank:

144758

Intron Class:

major

Intron Phase:

Intron Coordinates:

55387163 - 55396108

Intron Length:

8946

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTGAT

5'SS Class:

strong_major

3'SS Sequence:

TCTCGTTTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTACAT

U12 Branch Point Sequence:

TTTTGTTTCACT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

1.01

0.7

86.6

22.3

Major BPS

82.7

0.81

0.9

89.3

26.1

Major PPT

82.1

0.72

0.8

80.5

31.5

Minor 5ss

28.9

-2.4

3.2

39.6

46.4

Minor BPS

62.2

0.46

2.2

87.23

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025243

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031103

55387152 - 55425195

38044